Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTGGGTCGCCTACAGCTGCT
..((((((((((((...((((&))))...))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173060
GeneSymbolCAST
Binding site800,824
Score0.923
Seed1
Au0.544
Energy-18.3
Binding len24
Me-5.925
Phylopstem0.9176334999999999
Phylopflank1.3981511112499998
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure