Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGCTGCAGTTGCAGG
(((((((((((((..((((((&)))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173064
GeneSymbolIFNLR1
Binding site3045,3066
Score0.923
Seed1
Au0.353
Energy-27.8
Binding len21
Me-5.53
Phylopstem0.5417230876923076
Phylopflank-0.06570915599999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure