Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGCTGCAGTTGCAGG
(((((((((((((..((((((&)))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173065
GeneSymbolIFNLR1
Binding site3001,3022
Score0.923
Seed1
Au0.353
Energy-27.8
Binding len21
Me-5.53
Phylopstem-0.021066607692307684
Phylopflank0.15267823625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure