Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCTAGCTGACTCTTTCATTTATTTCCTTATTGCTTGGTATGTCAGGA
.((((((((((...((((....&.))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173076
GeneSymbolABCA12
Binding site4185,4235
Score0.923
Seed1
Au0.588
Energy-18.5
Binding len19
Me-9.286
Phylopstem-0.08534885000000003
Phylopflank-0.295048139
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure