Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTCAACCCCAGTGGCAT
.(((.((((.(((((..((((&))))...))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173077
GeneSymbolCPO
Binding site1222,1244
Score0.923
Seed0
Au0.4
Energy-20.7
Binding len22
Me-9.388
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure