Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATGCAGCTGCAGCTAAGGAAGCAT
.((((((((((((((((.((.&)).)))))))))))))......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173078
GeneSymbolSLITRK4
Binding site2250,2276
Score0.962
Seed1
Au0.529
Energy-24.8
Binding len26
Me-3.793
Phylopstem2.805851581818182
Phylopflank2.4837440749999997
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure