Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTCATTAACTGTAGCTGCAAA
(((((((((((((((......&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173078
GeneSymbolSLITRK4
Binding site2897,2919
Score0.923
Seed1
Au0.618
Energy-23.5
Binding len17
Me-4.171
Phylopstem4.213483666666667
Phylopflank4.003957685
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure