Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCGGCAGCTCACAGCCGAGCTGCGT
.(((((((.(((((((.((.(&.).)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349247
GeneSymbolTRAK1
Binding site1064,1094
Score0.923
Seed1
Au0.382
Energy-23.6
Binding len21
Me-4.85
Phylopstem3.4901072285714285
Phylopflank5.2751501224999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure