Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAAATTCTGGGCCGCAGTTGCT
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173082
GeneSymbolSHPRH
Binding site1735,1760
Score0.846
Seed1
Au0.515
Energy-22.3
Binding len14
Me-5.925
Phylopstem2.6645493499999997
Phylopflank3.22964713625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure