Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCACAATGCACCGCGGCGGGCAGC
((((.(((((((((((..(((&)))..)))....))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173083
GeneSymbolLIN9
Binding site308,335
Score0.846
Seed0
Au0.368
Energy-22.2
Binding len27
Me-8.057
Phylopstem2.9241651999999996
Phylopflank2.7431934699999996
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure