Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGTGGTGCATGTGGAGGAGCTGGCTTTGGCAGCCGCAGTCTGTAT
.((((((((((((((((((((&.)))))).))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173086
GeneSymbolKRT6C
Binding site204,254
Score0.923
Seed1
Au0.382
Energy-27.7
Binding len24
Me-3.793
Phylopstem-0.3168174181818182
Phylopflank0.010333760000000004
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure