Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGTGCGGCTGCGGA
(((((((((((.(.((.....&)).).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173087
GeneSymbolCAPN3
Binding site1216,1233
Score0.923
Seed1
Au0.397
Energy-19.7
Binding len17
Me-8.141
Phylopstem3.5543797272727264
Phylopflank3.82857710625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure