Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGATGCTCTGCAGTCTGACAAG
((((((((((((..(((.(((&)))..))).)))))).))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173087
GeneSymbolCAPN3
Binding site1412,1436
Score0.846
Seed1
Au0.456
Energy-19.2
Binding len24
Me-6.084
Phylopstem5.231476428571427
Phylopflank2.8285404062499997
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure