Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCTGACCCTGAGCCAGTGC
(((((((((...((.((((...&)))).))....))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173089
GeneSymbolCAPN3
Binding site19,40
Score0.846
Seed1
Au0.471
Energy-21.0
Binding len21
Me-12.087
Phylopstem0.03703125555555556
Phylopflank-0.3635583925
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure