Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCCAGCTCCTGGCCAAGTGCAGCAGCCGCAGCTTGTC
..((((((((((((((.....&.)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173092
GeneSymbolKCNH6
Binding site447,490
Score0.846
Seed1
Au0.324
Energy-23.7
Binding len17
Me-4.957
Phylopstem-0.26124955999999994
Phylopflank-0.48068311375
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end3
PositionCDS
2D Structure