Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCGACCCCAGCTGCT
..(((((((.(((((.(((..&.)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349250
GeneSymbolPLCH1
Binding site566,584
Score1.0
Seed1
Au0.441
Energy-23.2
Binding len18
Me-6.433
Phylopstem0.2875839714285715
Phylopflank0.36143213500000004
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure