Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCAGTTACAGCTGCAGTGCAGG
(((((.((((((((((((.((&.))..))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173163
GeneSymbolNFATC3
Binding site2317,2344
Score1.0
Seed0
Au0.529
Energy-23.9
Binding len23
Me-5.839
Phylopstem2.1274523333333333
Phylopflank1.7047645752499998
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure