Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGTACCCTGGGCAGATCAAAGAACATATTCTGTATGTCAGGC
.(((((((((((((((......&.))))....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173167
GeneSymbolUNC45B
Binding site3929,3974
Score0.923
Seed1
Au0.588
Energy-18.6
Binding len21
Me-3.793
Phylopstem0.20615318947368422
Phylopflank0.28779547999999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure