Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTTCCGGCTGCAAA
(((((((..(((..((.((((&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173174
GeneSymbolPTK2B
Binding site99,118
Score0.923
Seed1
Au0.5
Energy-20.5
Binding len19
Me-9.454
Phylopstem0.28964154285714283
Phylopflank0.45322939749999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure