Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCTCAGGCTGCAGCTGGAC
.(.(((((((((((....(((&))).....))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173175
GeneSymbolPTK2B
Binding site3221,3243
Score0.923
Seed0
Au0.353
Energy-20.6
Binding len22
Me-6.319
Phylopstem0.5817509727272727
Phylopflank0.70521537625
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end4
Position3UTR
2D Structure