Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTGTGTGCCAGC
..((((((((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173176
GeneSymbolPTK2B
Binding site2389,2405
Score0.846
Seed1
Au0.426
Energy-16.8
Binding len12
Me-8.071
Phylopstem2.7204999
Phylopflank3.209654145875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure