Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCTCAGGCTGCAGCTGGAC
.(.(((((((((((....(((&))).....))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173176
GeneSymbolPTK2B
Binding site3359,3381
Score0.962
Seed0
Au0.353
Energy-20.6
Binding len22
Me-6.319
Phylopstem2.1734727454545455
Phylopflank2.8019995049999995
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end4
Position3UTR
2D Structure