Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTAATAGCAGCTCCTCTTAGCCGCAGCA
.....((((((((((..(((.&.)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173178
GeneSymbolIL36B
Binding site190,220
Score1.0
Seed0
Au0.574
Energy-21.7
Binding len17
Me-13.899
Phylopstem0.52806911
Phylopflank0.40812035125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure