Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGACCTGTGAGCGCTGCAT
.((((((.((((((.((((((&)))))).)))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173179
GeneSymbolSLC35C2
Binding site253,278
Score0.846
Seed1
Au0.426
Energy-23.8
Binding len25
Me-6.842
Phylopstem-0.38985143
Phylopflank-0.28625643625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure