Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCTCAGCCCCATGCTGCGAT
(((((((((.(((((..(((.&)))...))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349253
GeneSymbolSCN11A
Binding site5151,5174
Score0.846
Seed1
Au0.5
Energy-22.2
Binding len23
Me-5.413
Phylopstem4.7337615
Phylopflank3.9265683888750003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure