Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCACTTCCGACTCTCTGGCTGCAAT
((((((((((((..((((((.&)))).))..))).).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349253
GeneSymbolSCN11A
Binding site539,567
Score0.846
Seed1
Au0.485
Energy-20.1
Binding len28
Me-6.084
Phylopstem0.0885554
Phylopflank-0.17345779249999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure