Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTGCAGCGCGGCGCCGCAGCTGGAC
.(.((((((((((((((.(((&)))..)))).......)))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173199
GeneSymbolNR4A3
Binding site193,222
Score0.846
Seed0
Au0.265
Energy-24.3
Binding len29
Me-5.351
Phylopstem5.572789761904762
Phylopflank4.578419584349999
Longest consecutive pairings10
Position of longest consecutive pairings3
Pairings in 3prime end7
Position5UTR
2D Structure