Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCAGGAGCTCGTC
.((.(((((((..((((((...&)))))).))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173200
GeneSymbolNR4A3
Binding site1610,1628
Score0.808
Seed0
Au0.265
Energy-22.9
Binding len18
Me-11.461
Phylopstem4.051699428571428
Phylopflank6.446240769999999
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure