Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCACCGAGCGTGCTGAGCAACCGCAGCCTCCGCGGCCGAGAGTGCAGC
((((((((((((((((..(((&.)))..)))))))))))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173216
GeneSymbolST6GAL1
Binding site255,307
Score0.821
Seed1
Au0.309
Energy-25.8
Binding len38
Me-3.938
Phylopstem-0.15755019709677415
Phylopflank0.3100062008750001
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end6
Position5UTR
2D Structure