Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGATGCTTGGTATCATCATCATGATGACGCTGTGTGACCAGGTG
((((((((((((.(((......&.))).)))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173217
GeneSymbolST6GAL1
Binding site942,990
Score0.846
Seed1
Au0.529
Energy-19.8
Binding len19
Me-5.227
Phylopstem4.594595692307692
Phylopflank3.9546557402500007
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure