Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTTGATTGTCATGCCAGT
..((((((((((((..((((((&))))))..))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173348
GeneSymbolFAM149B1
Binding site2946,2968
Score0.846
Seed1
Au0.75
Energy-20.0
Binding len22
Me-5.925
Phylopstem-1.358746823076923
Phylopflank-0.54948848375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure