Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCGCCCTGCCCTGCAGCTGCAAT
((((((((((((..(((.(((&.))).))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173351
GeneSymbolOR6B3
Binding site31,59
Score1.0
Seed1
Au0.412
Energy-26.7
Binding len22
Me-6.084
Phylopstem1.05947325
Phylopflank1.0869110125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure