Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCAGGTGGGGTGCCAGGA
.((((((((...((.(.(((((&)))))).))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173352
GeneSymbolKRT78
Binding site2447,2468
Score0.846
Seed1
Au0.426
Energy-18.7
Binding len21
Me-11.943
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure