Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTCTACACACCCCCAGCAGCCTCATGGGTGCCTGCAGTTGCT
..((((((((((((((..((.&.))..))))))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173352
GeneSymbolKRT78
Binding site2483,2530
Score0.923
Seed1
Au0.412
Energy-21.9
Binding len32
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure