Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCGCCAGGTGTGCCAGGC
.((((((((((..((..((...&))..)).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173354
GeneSymbolSIK1
Binding site1962,1980
Score0.846
Seed1
Au0.265
Energy-19.9
Binding len18
Me-8.662
Phylopstem0.59588289
Phylopflank0.66294938125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure