Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGCAGGGCCACAAGGGTGC
(((((((.(((((((((((...&)))))))).))))))).....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349269
GeneSymbolTMCC1
Binding site4355,4380
Score0.846
Seed1
Au0.603
Energy-23.5
Binding len25
Me-6.251
Phylopstem3.574857266666667
Phylopflank4.06618081
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure