Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTTCAACTGTAGCA
.....((((((((((...(((&)))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173355
GeneSymbolUPP2
Binding site772,789
Score0.846
Seed0
Au0.559
Energy-17.8
Binding len17
Me-13.899
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure