Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAAGACACTTCCCCCAGTCGGCTTTGGAGTCACGGGAGCTAGTGC
(((((((((((..(((((....&.)))))................))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173359
GeneSymbolEIF4E3
Binding site2052,2100
Score0.846
Seed1
Au0.456
Energy-24.7
Binding len34
Me-8.574
Phylopstem1.201549818181818
Phylopflank1.2412614275
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure