Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGACAGCCACGTGCAGTCTCAGAACTGCAGG
((((((((((((((((.((((&))))..))))))....))))........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173362
GeneSymbolRFESD
Binding site327,362
Score0.923
Seed1
Au0.485
Energy-21.0
Binding len35
Me-3.938
Phylopstem-0.45302059271428563
Phylopflank-0.7061964836749999
Longest consecutive pairings6
Position of longest consecutive pairings23
Pairings in 3prime end7
Position5UTR
2D Structure