Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCGAGCTGTGAA
((((((((.((((((..((((&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173462
GeneSymbolPAPLN
Binding site670,689
Score0.981
Seed1
Au0.5
Energy-22.7
Binding len19
Me-5.227
Phylopstem-0.43834800124999995
Phylopflank0.5956741616249999
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure