Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATAGGATGCCAGA
..((((((..(.((((((....&)))))).)..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173463
GeneSymbolCCDC149
Binding site3613,3630
Score0.846
Seed1
Au0.5
Energy-19.2
Binding len17
Me-10.603
Phylopstem4.412443333333334
Phylopflank2.8026434150000004
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end4
Position3UTR
2D Structure