Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCCCCACAACTTCTCCTCAAGGGAGGTTGCTCCCGCAGCTGGAGG
((.(((((((((..((((...&.))))..))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173463
GeneSymbolCCDC149
Binding site3485,3535
Score0.923
Seed0
Au0.426
Energy-23.5
Binding len20
Me-7.641
Phylopstem3.7190524444444444
Phylopflank3.0828602
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end4
Position3UTR
2D Structure