Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCCATGAGCGTGAAGACTTGGTGCAGCAGCTAGAGCGAG
(((((((((((((((((((((&))))))))))).......................))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173463
GeneSymbolCCDC149
Binding site630,678
Score0.923
Seed1
Au0.456
Energy-23.2
Binding len48
Me-3.938
Phylopstem1.9200895957446806
Phylopflank4.041774262500001
Longest consecutive pairings11
Position of longest consecutive pairings37
Pairings in 3prime end8
PositionCDS
2D Structure