Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGG
..((((((((...((((((...&.)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173465
GeneSymbolCOL23A1
Binding site1585,1629
Score1.0
Seed1
Au0.382
Energy-25.9
Binding len16
Me-12.418
Phylopstem0.6459214875
Phylopflank0.006948168749999983
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure