Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCTGGGTGTCCAGGCGGCCGCGCTGCAGG
(((((((.((((((((..((.&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173465
GeneSymbolCOL23A1
Binding site347,383
Score0.923
Seed1
Au0.206
Energy-26.2
Binding len21
Me-6.251
Phylopstem0.819971125
Phylopflank0.6253531937500001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure