Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGTGCTAGA
..((((((((((..((((....&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_173467
GeneSymbolMCAT
Binding site1786,1801
Score1.0
Seed1
Au0.529
Energy-18.2
Binding len15
Me-7.103
Phylopstem3.0523941999999997
Phylopflank1.9865728305
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure