Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGCCTCATGGAGCCAGC
..((((((((....(((((...&)))))......)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_173467
GeneSymbolMCAT
Binding site860,880
Score0.923
Seed1
Au0.382
Energy-22.3
Binding len20
Me-13.275
Phylopstem-0.44667280000000004
Phylopflank-0.16305058750000012
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure