Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAGGCAGCTGGGAG
((.(((((((..((((.(((.&))).))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173467
GeneSymbolMCAT
Binding site1097,1116
Score0.846
Seed0
Au0.412
Energy-20.1
Binding len19
Me-11.667
Phylopstem2.8696631857142862
Phylopflank2.5181191312499998
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure