Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGTGTCCTTTCTGCGTAG&TAGGAAGGACCTTCAGTGC
(((((.((((((((((.....&))))))))))...))))).
Details
MiRNAhsa-miR-892a
RefseqIDNM_001349273
GeneSymbolTMCC1
Binding site4177,4196
Score0.808
Seed0
Au0.544
Energy-19.3
Binding len19
Me-5.839
Phylopstem5.1254808
Phylopflank4.5750456
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure