Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTCCGACCTTGAAGTGCAGCTGTG
..(((((((((.((.((((((&.)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_173472
GeneSymbolFANCD2OS
Binding site374,401
Score0.904
Seed1
Au0.471
Energy-23.8
Binding len20
Me-9.039
Phylopstem5.277317555555555
Phylopflank2.8387073237499996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure